J3_6I7V_053

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

6I7V|1|AA|U|1212, 6I7V|1|AA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6I7V_053 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1157

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

6I7V|1|AA|C|990
6I7V|1|AA|U|991
6I7V|1|AA|U|992
6I7V|1|AA|G|993
6I7V|1|AA|A|994
6I7V|1|AA|C|995
6I7V|1|AA|A|996
6I7V|1|AA|U|997
*
6I7V|1|AA|A|1044
6I7V|1|AA|C|1045
6I7V|1|AA|A|1046
6I7V|1|AA|G|1047
*
6I7V|1|AA|C|1210
6I7V|1|AA|U|1211
6I7V|1|AA|U|1212
6I7V|1|AA|A|1213
6I7V|1|AA|C|1214
6I7V|1|AA|G|1215

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AN

30S ribosomal protein S14