J3_6I7V_077
3D structure
- PDB id
- 6I7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosomal protein paralogs bL31 and bL36
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GCA*UCAUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 6I7V|1|DA|A|2388, 6I7V|1|DA|U|2390, 6I7V|1|DA|A|2426
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6I7V_077 not in the Motif Atlas
- Homologous match to J3_5J7L_070
- Geometric discrepancy: 0.0549
- The information below is about J3_5J7L_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6I7V|1|DA|G|2282
6I7V|1|DA|C|2283
6I7V|1|DA|A|2284
*
6I7V|1|DA|U|2384
6I7V|1|DA|C|2385
6I7V|1|DA|A|2386
6I7V|1|DA|U|2387
6I7V|1|DA|A|2388
6I7V|1|DA|G|2389
6I7V|1|DA|U|2390
6I7V|1|DA|G|2391
6I7V|1|DA|A|2392
6I7V|1|DA|U|2393
6I7V|1|DA|C|2394
6I7V|1|DA|C|2395
*
6I7V|1|DA|G|2421
6I7V|1|DA|C|2422
6I7V|1|DA|U|2423
6I7V|1|DA|C|2424
6I7V|1|DA|A|2425
6I7V|1|DA|A|2426
6I7V|1|DA|C|2427
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain D2
- 50S ribosomal protein L33
- Chain D4
- 50S ribosomal protein L35
- Chain DM
- 50S ribosomal protein L15
- Chain DX
- 50S ribosomal protein L27
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