J3_6I7V_083

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AC*GAUAAGC*GAUUU

Length

14 nucleotides

Bulged bases

6I7V|1|CA|A|74

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6I7V_083 not in the Motif Atlas

Homologous match to J3_5J7L_037

Geometric discrepancy: 0.1526

The information below is about J3_5J7L_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_35667.2

Basepair signature

cWW-cWW-F-F-F-cWW-F-cWW

Number of instances in this motif group

7

Unit IDs

6I7V|1|CA|A|56
6I7V|1|CA|C|57
*
6I7V|1|CA|G|70
6I7V|1|CA|A|71
6I7V|1|CA|U|72
6I7V|1|CA|A|73
6I7V|1|CA|A|74
6I7V|1|CA|G|75
6I7V|1|CA|C|76
*
6I7V|1|CA|G|110
6I7V|1|CA|A|111
6I7V|1|CA|U|112
6I7V|1|CA|U|113
6I7V|1|CA|U|114

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C3

50S ribosomal protein L34

Chain CU

50S ribosomal protein L23

Chain CZ

50S ribosomal protein L29