J3_6I9R_007
3D structure
- PDB id
- 6I9R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCAAACCCACUCCACCUUACUACCAGACAACCUUAGCCA*UUACCCAAAUA*UUGAAACCUG
- Length
- 60 nucleotides
- Bulged bases
- 6I9R|1|A|U|1694, 6I9R|1|A|C|1699, 6I9R|1|A|U|1701, 6I9R|1|A|C|1707, 6I9R|1|A|A|1708, 6I9R|1|A|C|1715, 6I9R|1|A|U|1716, 6I9R|1|A|A|1762, 6I9R|1|A|A|1763, 6I9R|1|A|C|1764
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6I9R|1|A|C|1684
6I9R|1|A|C|1685
6I9R|1|A|A|1686
6I9R|1|A|A|1687
6I9R|1|A|A|1688
6I9R|1|A|C|1689
6I9R|1|A|C|1690
6I9R|1|A|C|1691
6I9R|1|A|A|1692
6I9R|1|A|C|1693
6I9R|1|A|U|1694
6I9R|1|A|C|1695
6I9R|1|A|C|1696
6I9R|1|A|A|1697
6I9R|1|A|C|1698
6I9R|1|A|C|1699
6I9R|1|A|U|1700
6I9R|1|A|U|1701
6I9R|1|A|A|1702
6I9R|1|A|C|1703
6I9R|1|A|U|1704
6I9R|1|A|A|1705
6I9R|1|A|C|1706
6I9R|1|A|C|1707
6I9R|1|A|A|1708
6I9R|1|A|G|1709
6I9R|1|A|A|1710
6I9R|1|A|C|1711
6I9R|1|A|A|1712
6I9R|1|A|A|1713
6I9R|1|A|C|1714
6I9R|1|A|C|1715
6I9R|1|A|U|1716
6I9R|1|A|U|1717
6I9R|1|A|A|1718
6I9R|1|A|G|1719
6I9R|1|A|C|1720
6I9R|1|A|C|1721
6I9R|1|A|A|1722
*
6I9R|1|A|U|1729
6I9R|1|A|U|1730
6I9R|1|A|A|1731
6I9R|1|A|C|1732
6I9R|1|A|C|1733
6I9R|1|A|C|1734
6I9R|1|A|A|1735
6I9R|1|A|A|1736
6I9R|1|A|A|1737
6I9R|1|A|U|1738
6I9R|1|A|A|1739
*
6I9R|1|A|U|1758
6I9R|1|A|U|1759
6I9R|1|A|G|1760
6I9R|1|A|A|1761
6I9R|1|A|A|1762
6I9R|1|A|A|1763
6I9R|1|A|C|1764
6I9R|1|A|C|1765
6I9R|1|A|U|1766
6I9R|1|A|G|1767
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 5
- 39S ribosomal protein L37, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain H
- 39S ribosomal protein L9, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain V
- 39S ribosomal protein L24, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: