J3_6K0A_001

3D structure

PDB id

6K0A (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of an archaeal Ribonuclease P

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CCAC*GUGCAAG*CGCUUAGCCGAAUGUCACCGAAAUUACAGAAG

Length

43 nucleotides

Bulged bases

6K0A|1|X|A|191, 6K0A|1|X|U|208, 6K0A|1|X|G|213, 6K0A|1|X|G|232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6K0A|1|X|C|47
6K0A|1|X|C|48
6K0A|1|X|A|49
6K0A|1|X|C|50
*
6K0A|1|X|G|187
6K0A|1|X|U|188
6K0A|1|X|G|189
6K0A|1|X|C|190
6K0A|1|X|A|191
6K0A|1|X|A|192
6K0A|1|X|G|193
*
6K0A|1|X|C|204
6K0A|1|X|G|205
6K0A|1|X|C|206
6K0A|1|X|U|207
6K0A|1|X|U|208
6K0A|1|X|A|209
6K0A|1|X|G|210
6K0A|1|X|C|211
6K0A|1|X|C|212
6K0A|1|X|G|213
6K0A|1|X|A|214
6K0A|1|X|A|215
6K0A|1|X|U|216
6K0A|1|X|G|217
6K0A|1|X|U|218
6K0A|1|X|C|219
6K0A|1|X|A|220
6K0A|1|X|C|221
6K0A|1|X|C|222
6K0A|1|X|G|223
6K0A|1|X|A|224
6K0A|1|X|A|225
6K0A|1|X|A|226
6K0A|1|X|U|227
6K0A|1|X|U|228
6K0A|1|X|A|229
6K0A|1|X|C|230
6K0A|1|X|A|231
6K0A|1|X|G|232
6K0A|1|X|A|233
6K0A|1|X|A|234
6K0A|1|X|G|235

Current chains

Chain X

RPR

Nearby chains

Chain A

Ribonuclease P protein component 2

Chain C

Ribonuclease P protein component 3

Chain D

Ribonuclease P protein component 3

Chain Y

Ribonuclease P; RNase P