J3_6KE6_004
3D structure
- PDB id
- 6KE6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GA*UUG*CCGCC
- Length
- 10 nucleotides
- Bulged bases
- 6KE6|1|SA|U|1628, 6KE6|1|SA|C|1639
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6KE6|1|SA|G|1150
6KE6|1|SA|A|1151
*
6KE6|1|SA|U|1627
6KE6|1|SA|U|1628
6KE6|1|SA|G|1629
*
6KE6|1|SA|C|1636
6KE6|1|SA|C|1637
6KE6|1|SA|G|1638
6KE6|1|SA|C|1639
6KE6|1|SA|C|1640
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain 5E
- U3 small nucleolar RNA-associated protein MPP10
- Chain 5G
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain B1
- Periodic tryptophan protein 2
- Chain B2
- U3 small nucleolar RNA-associated protein 12
- Chain B3
- U3 small nucleolar RNA-associated protein 13
- Chain RN
- Nucleolar complex protein 14
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