J3_6LU8_001

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

6LU8|1|2|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LU8|1|2|C|112
6LU8|1|2|A|113
6LU8|1|2|G|114
6LU8|1|2|C|115
6LU8|1|2|G|116
*
6LU8|1|2|C|155
6LU8|1|2|G|156
6LU8|1|2|U|157
6LU8|1|2|A|158
6LU8|1|2|C|159
6LU8|1|2|G|160
*
6LU8|1|2|C|275
6LU8|1|2|C|276
6LU8|1|2|G|277
6LU8|1|2|G|278

Current chains

Chain 2

28S rRNA

Nearby chains

Chain G

60S ribosomal protein L7a

Chain H

60S ribosomal protein L35

Chain K

60S ribosomal protein L36

Chain Q

60S ribosomal protein L13

Chain U

60S ribosomal protein L15