J3_6MTB_036

3D structure

PDB id

6MTB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

6MTB|1|5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTB|1|5|C|451
6MTB|1|5|A|452
6MTB|1|5|G|453
6MTB|1|5|U|454
6MTB|1|5|C|455
*
6MTB|1|5|G|701
6MTB|1|5|U|702
6MTB|1|5|G|703
6MTB|1|5|C|704
6MTB|1|5|G|705
*
6MTB|1|5|C|1292
6MTB|1|5|G|1293
6MTB|1|5|A|1294
6MTB|1|5|U|1295
6MTB|1|5|G|1296

Current chains

Chain 5

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L35a

Chain r

60S ribosomal protein L28