J3_6MTC_017
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAU*GCUUCU*AAGG
- Length
- 13 nucleotides
- Bulged bases
- 6MTC|1|5|U|4989
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6MTC|1|5|C|4970
6MTC|1|5|A|4971
6MTC|1|5|U|4972
*
6MTC|1|5|G|4986
6MTC|1|5|C|4987
6MTC|1|5|U|4988
6MTC|1|5|U|4989
6MTC|1|5|C|4990
6MTC|1|5|U|4991
*
6MTC|1|5|A|5060
6MTC|1|5|A|5061
6MTC|1|5|G|5062
6MTC|1|5|G|5063
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain P
- 60S ribosomal protein L17
- Chain d
- 60S ribosomal protein L31
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