J3_6MTE_001

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

6MTE|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|C|112
6MTE|1|5|A|113
6MTE|1|5|G|114
6MTE|1|5|C|115
6MTE|1|5|G|116
*
6MTE|1|5|C|155
6MTE|1|5|G|156
6MTE|1|5|U|157
6MTE|1|5|A|158
6MTE|1|5|C|159
6MTE|1|5|G|160
*
6MTE|1|5|C|275
6MTE|1|5|C|276
6MTE|1|5|G|277
6MTE|1|5|G|278

Current chains

Chain 5

28S rRNA

Nearby chains

Chain G

eL8

Chain L

eL13

Chain N

eL15

Chain h

uL29

Chain i

eL36