J3_6MTE_004

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUC*GCCGG*CCACGCGUCCCCCGCG

Length

24 nucleotides

Bulged bases

6MTE|1|5|C|1237, 6MTE|1|5|G|1271, 6MTE|1|5|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|C|982
6MTE|1|5|U|983
6MTE|1|5|C|984
*
6MTE|1|5|G|1070
6MTE|1|5|C|1071
6MTE|1|5|C|1072
6MTE|1|5|G|1073
6MTE|1|5|G|1074
*
6MTE|1|5|C|1236
6MTE|1|5|C|1237
6MTE|1|5|A|1238
6MTE|1|5|C|1239
6MTE|1|5|G|1244
6MTE|1|5|C|1245
6MTE|1|5|G|1246
6MTE|1|5|U|1247
6MTE|1|5|C|1248
6MTE|1|5|C|1249
6MTE|1|5|C|1250
6MTE|1|5|C|1251
6MTE|1|5|C|1252
6MTE|1|5|G|1271
6MTE|1|5|C|1272
6MTE|1|5|G|1273

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

uL4

Chain E

eL6

Chain F

uL30

Chain b

eL29