J3_6MTE_023

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

U(OMG)GA*UUAAGA*UA

Length

12 nucleotides

Bulged bases

6MTE|1|9|G|921

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|9|U|682
6MTE|1|9|OMG|683
6MTE|1|9|G|684
6MTE|1|9|A|685
*
6MTE|1|9|U|917
6MTE|1|9|U|918
6MTE|1|9|A|919
6MTE|1|9|A|920
6MTE|1|9|G|921
6MTE|1|9|A|922
*
6MTE|1|9|U|1022
6MTE|1|9|A|1023

Current chains

Chain 9

18S rRNA

Nearby chains

Chain HH

eS7

Chain LL

uS17

Chain NN

uS15

Chain WW

uS8

Chain XX

uS12

Chain bb

eS27