J3_6MTE_037

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

6MTE|1|5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|C|451
6MTE|1|5|A|452
6MTE|1|5|G|453
6MTE|1|5|U|454
6MTE|1|5|C|455
*
6MTE|1|5|G|701
6MTE|1|5|U|702
6MTE|1|5|G|703
6MTE|1|5|C|704
6MTE|1|5|G|705
*
6MTE|1|5|C|1292
6MTE|1|5|G|1293
6MTE|1|5|A|1294
6MTE|1|5|U|1295
6MTE|1|5|G|1296

Current chains

Chain 5

28S rRNA

Nearby chains

Chain E

eL6

Chain e

eL32

Chain f

eL33

Chain r

eL28