J3_6MTE_047

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCCCGGAC*GGGUG*UUAGAUGUC

Length

22 nucleotides

Bulged bases

6MTE|1|9|G|1274, 6MTE|1|9|G|1507, 6MTE|1|9|U|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|9|G|1270
6MTE|1|9|C|1271
6MTE|1|9|C|1272
6MTE|1|9|C|1273
6MTE|1|9|G|1274
6MTE|1|9|G|1275
6MTE|1|9|A|1276
6MTE|1|9|C|1277
*
6MTE|1|9|G|1320
6MTE|1|9|G|1321
6MTE|1|9|G|1322
6MTE|1|9|U|1323
6MTE|1|9|G|1324
*
6MTE|1|9|U|1504
6MTE|1|9|U|1505
6MTE|1|9|A|1506
6MTE|1|9|G|1507
6MTE|1|9|A|1508
6MTE|1|9|U|1509
6MTE|1|9|G|1510
6MTE|1|9|U|1511
6MTE|1|9|C|1512

Current chains

Chain 9

18S rRNA

Nearby chains

Chain KK

eS10

Chain PP

uS19

Chain dd

uS14

Chain ff

eS31

Chain v

eEF2