J3_6MTE_049
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- U(OMG)G*UAAGA*UA
- Length
- 10 nucleotides
- Bulged bases
- 6MTE|1|9|G|921
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6MTE_049 not in the Motif Atlas
- Geometric match to J3_8P9A_071
- Geometric discrepancy: 0.1274
- The information below is about J3_8P9A_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01633.1
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6MTE|1|9|U|682
6MTE|1|9|OMG|683
6MTE|1|9|G|684
*
6MTE|1|9|U|918
6MTE|1|9|A|919
6MTE|1|9|A|920
6MTE|1|9|G|921
6MTE|1|9|A|922
*
6MTE|1|9|U|1022
6MTE|1|9|A|1023
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain HH
- eS7
- Chain LL
- uS17
- Chain NN
- uS15
- Chain WW
- uS8
- Chain XX
- uS12
- Chain bb
- eS27
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