J3_6N9F_006

3D structure

PDB id

6N9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GGAG*CUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N9F|1|1A|G|1101
6N9F|1|1A|G|1102
6N9F|1|1A|A|1103
6N9F|1|1A|G|1104
*
6N9F|1|1A|C|1126
6N9F|1|1A|U|1127
6N9F|1|1A|U|1128
6N9F|1|1A|U|1129
6N9F|1|1A|A|1130
6N9F|1|1A|A|1131
6N9F|1|1A|A|1132
6N9F|1|1A|G|1133
*
6N9F|1|1A|C|1148
6N9F|1|1A|A|1149
6N9F|1|1A|C|1150

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 19

50S Ribosomal Protein L36