J3_6N9F_058
3D structure
- PDB id
- 6N9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UGGAAU*GGAACGCCGAUGG*CAG
- Length
- 22 nucleotides
- Bulged bases
- 6N9F|1|1a|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N9F|1|1a|U|672
6N9F|1|1a|G|673
6N9F|1|1a|G|674
6N9F|1|1a|A|675
6N9F|1|1a|A|676
6N9F|1|1a|U|677
*
6N9F|1|1a|G|713
6N9F|1|1a|G|714
6N9F|1|1a|A|715
6N9F|1|1a|A|716
6N9F|1|1a|C|717
6N9F|1|1a|G|718
6N9F|1|1a|C|719
6N9F|1|1a|C|720
6N9F|1|1a|G|721
6N9F|1|1a|A|722
6N9F|1|1a|U|723
6N9F|1|1a|G|724
6N9F|1|1a|G|725
*
6N9F|1|1a|C|732
6N9F|1|1a|A|733
6N9F|1|1a|G|734
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1D
- 50S Ribosomal Protein L2
- Chain 1f
- 30S Ribosomal Protein S6
- Chain 1k
- 30S ribosomal protein S11
- Chain 1o
- 30S ribosomal protein S15
- Chain 1r
- 30S ribosomal protein S18
Coloring options: