J3_6N9F_074

3D structure

PDB id

6N9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GGAACC*GGGUGCC*GGAGCC

Length

19 nucleotides

Bulged bases

6N9F|1|1a|G|1026

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N9F|1|1a|G|1002
6N9F|1|1a|G|1003
6N9F|1|1a|A|1004
6N9F|1|1a|A|1005
6N9F|1|1a|C|1006
6N9F|1|1a|C|1007
*
6N9F|1|1a|G|1022
6N9F|1|1a|G|1023
6N9F|1|1a|G|1024
6N9F|1|1a|U|1025
6N9F|1|1a|G|1026
6N9F|1|1a|C|1027
6N9F|1|1a|C|1028
*
6N9F|1|1a|G|1033
6N9F|1|1a|G|1034
6N9F|1|1a|A|1035
6N9F|1|1a|G|1036
6N9F|1|1a|C|1037
6N9F|1|1a|C|1038

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains