J3_6NDK_006

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

UGGAG*CUAC*GGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|QA|U|943
6NDK|1|QA|G|944
6NDK|1|QA|G|945
6NDK|1|QA|A|946
6NDK|1|QA|G|947
*
6NDK|1|QA|C|1234
6NDK|1|QA|U|1235
6NDK|1|QA|A|1236
6NDK|1|QA|C|1237
*
6NDK|1|QA|G|1337
6NDK|1|QA|G|1338
6NDK|1|QA|A|1339
6NDK|1|QA|A|1340

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QI

30S ribosomal protein S9

Chain QM

30S ribosomal protein S13

Chain QU

30S ribosomal protein Thx

Chain QV

Transfer RNA; tRNA