J3_6NDK_009

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GGGAAC*GGUGCC*GGAGCCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|QA|G|1001|||B
6NDK|1|QA|G|1002
6NDK|1|QA|G|1003
6NDK|1|QA|A|1004
6NDK|1|QA|A|1005
6NDK|1|QA|C|1006
*
6NDK|1|QA|G|1023
6NDK|1|QA|G|1024
6NDK|1|QA|U|1025
6NDK|1|QA|G|1026
6NDK|1|QA|C|1027
6NDK|1|QA|C|1028
*
6NDK|1|QA|G|1033
6NDK|1|QA|G|1034
6NDK|1|QA|A|1035
6NDK|1|QA|G|1036
6NDK|1|QA|C|1037
6NDK|1|QA|C|1038
6NDK|1|QA|C|1039

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QC

30S ribosomal protein S3

Chain YA

Large subunit ribosomal RNA; LSU rRNA