J3_6NDK_027

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CG*CGGUAAG*CGAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|RA|C|2789
6NDK|1|RA|G|2792
*
6NDK|1|RA|C|2804
6NDK|1|RA|G|2805
6NDK|1|RA|G|2807
6NDK|1|RA|U|2808
6NDK|1|RA|A|2809
6NDK|1|RA|A|2810
6NDK|1|RA|G|2811
*
6NDK|1|RA|C|2889
6NDK|1|RA|G|2891
6NDK|1|RA|A|2892
6NDK|1|RA|G|2893
6NDK|1|RA|G|2894

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3