J3_6NDK_061

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

UGCC*GGUGUU*GCAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|QA|U|1073
6NDK|1|QA|G|1074
6NDK|1|QA|C|1075
6NDK|1|QA|C|1076
*
6NDK|1|QA|G|1081
6NDK|1|QA|G|1082
6NDK|1|QA|U|1083
6NDK|1|QA|G|1084
6NDK|1|QA|U|1085
6NDK|1|QA|U|1086
*
6NDK|1|QA|G|1099
6NDK|1|QA|C|1100
6NDK|1|QA|A|1101
6NDK|1|QA|A|1102

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QB

30S ribosomal protein S2

Chain QE

30S ribosomal protein S5