J3_6NDK_070

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CGG*CUAGAC*GUGACG

Length

15 nucleotides

Bulged bases

6NDK|1|XA|A|653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|XA|C|586
6NDK|1|XA|G|587
6NDK|1|XA|G|588
*
6NDK|1|XA|C|651
6NDK|1|XA|U|652
6NDK|1|XA|A|653
6NDK|1|XA|G|654
6NDK|1|XA|A|655
6NDK|1|XA|C|656
*
6NDK|1|XA|G|750
6NDK|1|XA|U|751
6NDK|1|XA|G|752
6NDK|1|XA|A|753
6NDK|1|XA|C|754
6NDK|1|XA|G|755

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XH

30S ribosomal protein S8

Chain XL

30S ribosomal protein S12

Chain XO

30S ribosomal protein S15

Chain XQ

30S ribosomal protein S17