J3_6NDK_081

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

ACC*GUGGAU*AAUCGU

Length

15 nucleotides

Bulged bases

6NDK|1|YA|G|2833, 6NDK|1|YA|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NDK|1|YA|A|2813
6NDK|1|YA|C|2814
6NDK|1|YA|C|2815
*
6NDK|1|YA|G|2831
6NDK|1|YA|U|2832
6NDK|1|YA|G|2833
6NDK|1|YA|G|2834
6NDK|1|YA|A|2835
6NDK|1|YA|U|2836
*
6NDK|1|YA|A|2882
6NDK|1|YA|A|2883
6NDK|1|YA|U|2884
6NDK|1|YA|C|2885
6NDK|1|YA|G|2886
6NDK|1|YA|U|2887

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y5

50S ribosomal protein L32

Chain YE

50S ribosomal protein L3

Chain YR

50S ribosomal protein L17