3D structure

PDB id
6NQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CUUGACAU*ACAGGUGC*GCCCUUACG
Length
25 nucleotides
Bulged bases
6NQB|1|A|U|1049, 6NQB|1|A|U|1212
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NQB|1|A|C|990
6NQB|1|A|U|991
6NQB|1|A|U|992
6NQB|1|A|G|993
6NQB|1|A|A|994
6NQB|1|A|C|995
6NQB|1|A|A|996
6NQB|1|A|U|997
*
6NQB|1|A|A|1044
6NQB|1|A|C|1045
6NQB|1|A|A|1046
6NQB|1|A|G|1047
6NQB|1|A|G|1048
6NQB|1|A|U|1049
6NQB|1|A|G|1050
6NQB|1|A|C|1051
*
6NQB|1|A|G|1207
6NQB|1|A|C|1208
6NQB|1|A|C|1209
6NQB|1|A|C|1210
6NQB|1|A|U|1211
6NQB|1|A|U|1212
6NQB|1|A|A|1213
6NQB|1|A|C|1214
6NQB|1|A|G|1215

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain C
30S ribosomal protein S3
Chain N
30S ribosomal protein S14

Coloring options:

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