J3_6NQB_009

3D structure

PDB id

6NQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCUAAC*GGGGAAUAUUG*CAGC

Length

22 nucleotides

Bulged bases

6NQB|1|A|C|48, 6NQB|1|A|A|50, 6NQB|1|A|A|51, 6NQB|1|A|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NQB|1|A|G|46
6NQB|1|A|C|47
6NQB|1|A|C|48
6NQB|1|A|U|49
6NQB|1|A|A|50
6NQB|1|A|A|51
6NQB|1|A|C|52
*
6NQB|1|A|G|359
6NQB|1|A|G|360
6NQB|1|A|G|361
6NQB|1|A|G|362
6NQB|1|A|A|363
6NQB|1|A|A|364
6NQB|1|A|U|365
6NQB|1|A|A|366
6NQB|1|A|U|367
6NQB|1|A|U|368
6NQB|1|A|G|369
*
6NQB|1|A|C|392
6NQB|1|A|A|393
6NQB|1|A|G|394
6NQB|1|A|C|395

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain P

30S RIBOSOMAL PROTEIN bS16