J3_6NQB_012

3D structure

PDB id

6NQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCACAAGCG*CGCUAGUAA*UGAAUACGUUCCC

Length

31 nucleotides

Bulged bases

6NQB|1|A|U|1345

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NQB|1|A|G|933
6NQB|1|A|C|934
6NQB|1|A|A|935
6NQB|1|A|C|936
6NQB|1|A|A|937
6NQB|1|A|A|938
6NQB|1|A|G|939
6NQB|1|A|C|940
6NQB|1|A|G|941
*
6NQB|1|A|C|1342
6NQB|1|A|G|1343
6NQB|1|A|C|1344
6NQB|1|A|U|1345
6NQB|1|A|A|1346
6NQB|1|A|G|1347
6NQB|1|A|U|1348
6NQB|1|A|A|1349
6NQB|1|A|A|1350
*
6NQB|1|A|U|1372
6NQB|1|A|G|1373
6NQB|1|A|A|1374
6NQB|1|A|A|1375
6NQB|1|A|U|1376
6NQB|1|A|A|1377
6NQB|1|A|C|1378
6NQB|1|A|G|1379
6NQB|1|A|U|1380
6NQB|1|A|U|1381
6NQB|1|A|C|1382
6NQB|1|A|C|1383
6NQB|1|A|C|1384

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains