3D structure

PDB id
6NQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
UUAUCCU*AGGAGACUGC*GAGGAAGGUGG
Length
28 nucleotides
Bulged bases
6NQB|1|A|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NQB|1|A|U|1115
6NQB|1|A|U|1116
6NQB|1|A|A|1117
6NQB|1|A|U|1118
6NQB|1|A|C|1119
6NQB|1|A|C|1120
6NQB|1|A|U|1121
*
6NQB|1|A|A|1152
6NQB|1|A|G|1153
6NQB|1|A|G|1154
6NQB|1|A|A|1155
6NQB|1|A|G|1156
6NQB|1|A|A|1157
6NQB|1|A|C|1158
6NQB|1|A|U|1159
6NQB|1|A|G|1160
6NQB|1|A|C|1161
*
6NQB|1|A|G|1175
6NQB|1|A|A|1176
6NQB|1|A|G|1177
6NQB|1|A|G|1178
6NQB|1|A|A|1179
6NQB|1|A|A|1180
6NQB|1|A|G|1181
6NQB|1|A|G|1182
6NQB|1|A|U|1183
6NQB|1|A|G|1184
6NQB|1|A|G|1185

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain B
30S ribosomal protein S2
Chain J
30S ribosomal protein S10
Chain N
30S ribosomal protein S14

Coloring options:

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