3D structure

PDB id
6NQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CAAUGG*UCGUAGUCC*GUCG
Length
19 nucleotides
Bulged bases
6NQB|1|A|A|1239
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NQB|1|A|C|1237
6NQB|1|A|A|1238
6NQB|1|A|A|1239
6NQB|1|A|U|1240
6NQB|1|A|G|1241
6NQB|1|A|G|1242
*
6NQB|1|A|U|1295
6NQB|1|A|C|1296
6NQB|1|A|G|1297
6NQB|1|A|U|1298
6NQB|1|A|A|1299
6NQB|1|A|G|1300
6NQB|1|A|U|1301
6NQB|1|A|C|1302
6NQB|1|A|C|1303
*
6NQB|1|A|G|1334
6NQB|1|A|U|1335
6NQB|1|A|C|1336
6NQB|1|A|G|1337

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

Coloring options:

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