J3_6NSH_018

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

6NSH|1|RA|U|1083

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NSH|1|RA|G|1055
6NSH|1|RA|G|1056
6NSH|1|RA|A|1057
*
6NSH|1|RA|U|1081
6NSH|1|RA|U|1082
6NSH|1|RA|U|1083
6NSH|1|RA|A|1084
6NSH|1|RA|A|1085
6NSH|1|RA|A|1086
6NSH|1|RA|G|1087
*
6NSH|1|RA|C|1102
6NSH|1|RA|A|1103
6NSH|1|RA|C|1104

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36