J3_6NSH_042

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GUG*CGAGUAC*GGAAUC

Length

16 nucleotides

Bulged bases

6NSH|1|YA|U|271|||C, 6NSH|1|YA|G|370

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NSH|1|YA|G|271|||B
6NSH|1|YA|U|271|||C
6NSH|1|YA|G|271|||D
*
6NSH|1|YA|C|366
6NSH|1|YA|G|370
6NSH|1|YA|A|371
6NSH|1|YA|G|372
6NSH|1|YA|U|373
6NSH|1|YA|A|374
6NSH|1|YA|C|375
*
6NSH|1|YA|G|399
6NSH|1|YA|G|400
6NSH|1|YA|A|401
6NSH|1|YA|A|402
6NSH|1|YA|U|403
6NSH|1|YA|C|404

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YI

50S ribosomal protein L9