J3_6NSH_059

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGCCG*CGGGACUGC*GAGGAAGGAG

Length

24 nucleotides

Bulged bases

6NSH|1|QA|G|1178, 6NSH|1|QA|A|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NSH|1|QA|C|1116
6NSH|1|QA|G|1117
6NSH|1|QA|C|1118
6NSH|1|QA|C|1119
6NSH|1|QA|G|1120
*
6NSH|1|QA|C|1153
6NSH|1|QA|G|1154
6NSH|1|QA|G|1155
6NSH|1|QA|G|1156
6NSH|1|QA|A|1157
6NSH|1|QA|C|1158
6NSH|1|QA|U|1159
6NSH|1|QA|G|1160
6NSH|1|QA|C|1161
*
6NSH|1|QA|G|1175
6NSH|1|QA|A|1176
6NSH|1|QA|G|1177
6NSH|1|QA|G|1178
6NSH|1|QA|A|1179
6NSH|1|QA|A|1180
6NSH|1|QA|G|1181
6NSH|1|QA|G|1182
6NSH|1|QA|A|1183
6NSH|1|QA|G|1184

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QB

30S ribosomal protein S2

Chain QI

30S ribosomal protein S9

Chain QJ

30S ribosomal protein S10

Chain QN

30S ribosomal protein S14 type Z