J3_6NSH_076

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CACGG*CCGGUAAG*CGAGG

Length

18 nucleotides

Bulged bases

6NSH|1|YA|A|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NSH|1|YA|C|2789
6NSH|1|YA|A|2790
6NSH|1|YA|C|2791
6NSH|1|YA|G|2792
6NSH|1|YA|G|2793
*
6NSH|1|YA|C|2803
6NSH|1|YA|C|2804
6NSH|1|YA|G|2805
6NSH|1|YA|G|2807
6NSH|1|YA|U|2808
6NSH|1|YA|A|2809
6NSH|1|YA|A|2810
6NSH|1|YA|G|2811
*
6NSH|1|YA|C|2889
6NSH|1|YA|G|2891
6NSH|1|YA|A|2892
6NSH|1|YA|G|2893
6NSH|1|YA|G|2894

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YE

50S ribosomal protein L3

Chain YW

50S ribosomal protein L22