J3_6NTA_007

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUGACAUG*CACAG*CUUACG

Length

20 nucleotides

Bulged bases

6NTA|1|QA|U|1212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NTA|1|QA|C|990
6NTA|1|QA|U|991
6NTA|1|QA|U|992
6NTA|1|QA|G|993
6NTA|1|QA|A|994
6NTA|1|QA|C|995
6NTA|1|QA|A|996
6NTA|1|QA|U|997
6NTA|1|QA|G|998
*
6NTA|1|QA|C|1043
6NTA|1|QA|A|1044
6NTA|1|QA|C|1045
6NTA|1|QA|A|1046
6NTA|1|QA|G|1047
*
6NTA|1|QA|C|1210
6NTA|1|QA|U|1211
6NTA|1|QA|U|1212
6NTA|1|QA|A|1213
6NTA|1|QA|C|1214
6NTA|1|QA|G|1215

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QN

30S ribosomal protein S14 type Z

Chain YA

Large subunit ribosomal RNA; LSU rRNA