J3_6NTA_025

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CACGG*CCGGUAAG*CGAGG

Length

18 nucleotides

Bulged bases

6NTA|1|RA|A|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NTA|1|RA|C|2789
6NTA|1|RA|A|2790
6NTA|1|RA|C|2791
6NTA|1|RA|G|2792
6NTA|1|RA|G|2793
*
6NTA|1|RA|C|2803
6NTA|1|RA|C|2804
6NTA|1|RA|G|2805
6NTA|1|RA|G|2807
6NTA|1|RA|U|2808
6NTA|1|RA|A|2809
6NTA|1|RA|A|2810
6NTA|1|RA|G|2811
*
6NTA|1|RA|C|2889
6NTA|1|RA|G|2891
6NTA|1|RA|A|2892
6NTA|1|RA|G|2893
6NTA|1|RA|G|2894

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RW

50S ribosomal protein L22