J3_6NWY_050

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CACGGC*GCCGGUAAG*CGAGG

Length

20 nucleotides

Bulged bases

6NWY|1|YA|A|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NWY|1|YA|C|2789
6NWY|1|YA|A|2790
6NWY|1|YA|C|2791
6NWY|1|YA|G|2792
6NWY|1|YA|G|2793
6NWY|1|YA|C|2794
*
6NWY|1|YA|G|2802
6NWY|1|YA|C|2803
6NWY|1|YA|C|2804
6NWY|1|YA|G|2805
6NWY|1|YA|G|2807
6NWY|1|YA|U|2808
6NWY|1|YA|A|2809
6NWY|1|YA|A|2810
6NWY|1|YA|G|2811
*
6NWY|1|YA|C|2889
6NWY|1|YA|G|2891
6NWY|1|YA|A|2892
6NWY|1|YA|G|2893
6NWY|1|YA|G|2894

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YE

50S ribosomal protein L3

Chain YW

50S ribosomal protein L22