3D structure

PDB id
6NWY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
ACC*GUGGAU*AAUCGU
Length
15 nucleotides
Bulged bases
6NWY|1|RA|G|2833, 6NWY|1|RA|A|2835
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NWY|1|RA|A|2813
6NWY|1|RA|C|2814
6NWY|1|RA|C|2815
*
6NWY|1|RA|G|2831
6NWY|1|RA|U|2832
6NWY|1|RA|G|2833
6NWY|1|RA|G|2834
6NWY|1|RA|A|2835
6NWY|1|RA|U|2836
*
6NWY|1|RA|A|2882
6NWY|1|RA|A|2883
6NWY|1|RA|U|2884
6NWY|1|RA|C|2885
6NWY|1|RA|G|2886
6NWY|1|RA|U|2887

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R5
50S ribosomal protein L32
Chain RE
50S ribosomal protein L3
Chain RR
50S ribosomal protein L17
Chain RT
50S ribosomal protein L19

Coloring options:

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