J3_6NWY_071

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CAAUG*CCCAGUUCGGAUUG*CAUGAAGCCG

Length

29 nucleotides

Bulged bases

6NWY|1|XA|U|1240, 6NWY|1|XA|C|1298, 6NWY|1|XA|U|1302, 6NWY|1|XA|C|1336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NWY|1|XA|C|1237
6NWY|1|XA|A|1238
6NWY|1|XA|A|1239
6NWY|1|XA|U|1240
6NWY|1|XA|G|1241
*
6NWY|1|XA|C|1296
6NWY|1|XA|C|1297
6NWY|1|XA|C|1298
6NWY|1|XA|A|1299
6NWY|1|XA|G|1300
6NWY|1|XA|U|1301
6NWY|1|XA|U|1302
6NWY|1|XA|C|1303
6NWY|1|XA|G|1304
6NWY|1|XA|G|1305
6NWY|1|XA|A|1306
6NWY|1|XA|U|1307
6NWY|1|XA|U|1308
6NWY|1|XA|G|1309
*
6NWY|1|XA|C|1328
6NWY|1|XA|A|1329
6NWY|1|XA|U|1330
6NWY|1|XA|G|1331
6NWY|1|XA|A|1332
6NWY|1|XA|A|1333
6NWY|1|XA|G|1334
6NWY|1|XA|C|1335
6NWY|1|XA|C|1336
6NWY|1|XA|G|1337

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XG

30S ribosomal protein S7

Chain XM

30S ribosomal protein S13

Chain XS

30S ribosomal protein S19

Chain XU

30S ribosomal protein Thx