J3_6O8X_011
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- CC*GUAGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 6O8X|1|A|A|2844, 6O8X|1|A|A|2846
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6O8X_011 not in the Motif Atlas
- Homologous match to J3_7RQB_014
- Geometric discrepancy: 0.1759
- The information below is about J3_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_95952.1
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6O8X|1|A|C|2825
6O8X|1|A|C|2826
*
6O8X|1|A|G|2842
6O8X|1|A|U|2843
6O8X|1|A|A|2844
6O8X|1|A|G|2845
6O8X|1|A|A|2846
6O8X|1|A|U|2847
*
6O8X|1|A|A|2893
6O8X|1|A|A|2894
6O8X|1|A|U|2895
6O8X|1|A|C|2896
6O8X|1|A|G|2897
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain O
- 50S ribosomal protein L17
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