J3_6O8X_021
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- UG*UGUUG*CGCAA
- Length
- 12 nucleotides
- Bulged bases
- 6O8X|1|a|A|1117
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6O8X_021 not in the Motif Atlas
- Homologous match to J3_6CZR_024
- Geometric discrepancy: 0.3119
- The information below is about J3_6CZR_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04260.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6O8X|1|a|U|1089
6O8X|1|a|G|1090
*
6O8X|1|a|U|1099
6O8X|1|a|G|1100
6O8X|1|a|U|1101
6O8X|1|a|U|1102
6O8X|1|a|G|1103
*
6O8X|1|a|C|1114
6O8X|1|a|G|1115
6O8X|1|a|C|1116
6O8X|1|a|A|1117
6O8X|1|a|A|1118
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain e
- 30S ribosomal protein S5
Coloring options: