J3_6O8Z_027

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

AUGCAUGCGAUUGGAAGUGCAUGUC*GGGAG*CGAAGU

Length

36 nucleotides

Bulged bases

6O8Z|1|A|A|1495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O8Z|1|A|A|1486
6O8Z|1|A|U|1487
6O8Z|1|A|G|1488
6O8Z|1|A|C|1489
6O8Z|1|A|A|1490
6O8Z|1|A|U|1491
6O8Z|1|A|G|1492
6O8Z|1|A|C|1493
6O8Z|1|A|G|1494
6O8Z|1|A|A|1495
6O8Z|1|A|U|1496
6O8Z|1|A|U|1497
6O8Z|1|A|G|1498
6O8Z|1|A|G|1499
6O8Z|1|A|A|1500
6O8Z|1|A|A|1501
6O8Z|1|A|G|1502
6O8Z|1|A|U|1503
6O8Z|1|A|G|1504
6O8Z|1|A|C|1505
6O8Z|1|A|A|1506
6O8Z|1|A|U|1507
6O8Z|1|A|G|1508
6O8Z|1|A|U|1509
6O8Z|1|A|C|1510
*
6O8Z|1|A|G|1569
6O8Z|1|A|G|1570
6O8Z|1|A|G|1571
6O8Z|1|A|A|1572
6O8Z|1|A|G|1573
*
6O8Z|1|A|C|1588
6O8Z|1|A|G|1589
6O8Z|1|A|A|1590
6O8Z|1|A|A|1591
6O8Z|1|A|G|1592
6O8Z|1|A|U|1593

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L17