J3_6O8Z_034

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UUGACCAC*GCUUUCCC*GACAA

Length

21 nucleotides

Bulged bases

6O8Z|1|a|C|1021, 6O8Z|1|a|C|1038, 6O8Z|1|a|U|1039, 6O8Z|1|a|U|1040, 6O8Z|1|a|U|1041

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O8Z|1|a|U|1017
6O8Z|1|a|U|1018
6O8Z|1|a|G|1019
6O8Z|1|a|A|1020
6O8Z|1|a|C|1021
6O8Z|1|a|C|1022
6O8Z|1|a|A|1023
6O8Z|1|a|C|1024
*
6O8Z|1|a|G|1037
6O8Z|1|a|C|1038
6O8Z|1|a|U|1039
6O8Z|1|a|U|1040
6O8Z|1|a|U|1041
6O8Z|1|a|C|1042
6O8Z|1|a|C|1043
6O8Z|1|a|C|1044
*
6O8Z|1|a|G|1051
6O8Z|1|a|A|1052
6O8Z|1|a|C|1053
6O8Z|1|a|A|1054
6O8Z|1|a|A|1055

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14 type Z