J3_6O9K_010

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

6O9K|1|A|U|2334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O9K|1|A|C|2295
6O9K|1|A|U|2296
6O9K|1|A|A|2297
6O9K|1|A|A|2298
6O9K|1|A|U|2299
*
6O9K|1|A|A|2317
6O9K|1|A|G|2318
6O9K|1|A|G|2319
6O9K|1|A|U|2320
6O9K|1|A|U|2321
6O9K|1|A|A|2322
6O9K|1|A|G|2323
*
6O9K|1|A|C|2332
6O9K|1|A|A|2333
6O9K|1|A|U|2334
6O9K|1|A|A|2335
6O9K|1|A|A|2336
6O9K|1|A|G|2337

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L27

Chain F

50S ribosomal protein L5

Chain O

50S ribosomal protein L18

Chain X

5S ribosomal RNA; 5S rRNA