3D structure

PDB id
6O9K (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S initiation complex
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CUAAU*AGGUUAG*CAUAAG
Length
18 nucleotides
Bulged bases
6O9K|1|A|U|2334
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6O9K|1|A|C|2295
6O9K|1|A|U|2296
6O9K|1|A|A|2297
6O9K|1|A|A|2298
6O9K|1|A|U|2299
*
6O9K|1|A|A|2317
6O9K|1|A|G|2318
6O9K|1|A|G|2319
6O9K|1|A|U|2320
6O9K|1|A|U|2321
6O9K|1|A|A|2322
6O9K|1|A|G|2323
*
6O9K|1|A|C|2332
6O9K|1|A|A|2333
6O9K|1|A|U|2334
6O9K|1|A|A|2335
6O9K|1|A|A|2336
6O9K|1|A|G|2337

Current chains

Chain A
23S rRNA

Nearby chains

Chain 0
50S ribosomal protein L27
Chain F
50S ribosomal protein L5
Chain O
50S ribosomal protein L18
Chain X
5S ribosomal RNA; 5S rRNA

Coloring options:

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