J3_6O9K_032

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUGA*UCUAAC*GGACAG

Length

16 nucleotides

Bulged bases

6O9K|1|A|A|2198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O9K|1|A|C|2091
6O9K|1|A|U|2092
6O9K|1|A|G|2093
6O9K|1|A|A|2094
*
6O9K|1|A|U|2195
6O9K|1|A|C|2196
6O9K|1|A|U|2197
6O9K|1|A|A|2198
6O9K|1|A|A|2199
6O9K|1|A|C|2200
*
6O9K|1|A|G|2223
6O9K|1|A|G|2224
6O9K|1|A|A|2225
6O9K|1|A|C|2226
6O9K|1|A|A|2227
6O9K|1|A|G|2228

Current chains

Chain A

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L28

Chain 9

50S ribosomal protein L2