J3_6OFX_032

3D structure

PDB id

6OFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-rotated ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUAAUC*GAGGUUAG*CAUAAG

Length

20 nucleotides

Bulged bases

6OFX|1|1|U|2334, 6OFX|1|1|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OFX|1|1|C|2295
6OFX|1|1|U|2296
6OFX|1|1|A|2297
6OFX|1|1|A|2298
6OFX|1|1|U|2299
6OFX|1|1|C|2300
*
6OFX|1|1|G|2316
6OFX|1|1|A|2317
6OFX|1|1|G|2318
6OFX|1|1|G|2319
6OFX|1|1|U|2320
6OFX|1|1|U|2321
6OFX|1|1|A|2322
6OFX|1|1|G|2323
*
6OFX|1|1|C|2332
6OFX|1|1|A|2333
6OFX|1|1|U|2334
6OFX|1|1|A|2335
6OFX|1|1|A|2336
6OFX|1|1|G|2337

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

5S ribosomal RNA; 5S rRNA

Chain e

50S ribosomal protein L5

Chain o

50S ribosomal protein L18

Chain w

50S ribosomal protein L27