J3_6OLG_003

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCGCAGUCC*GUGCG*CGACGUC

Length

21 nucleotides

Bulged bases

6OLG|1|A2|G|447, 6OLG|1|A2|U|448

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|G|442
6OLG|1|A2|C|443
6OLG|1|A2|G|444
6OLG|1|A2|C|445
6OLG|1|A2|A|446
6OLG|1|A2|G|447
6OLG|1|A2|U|448
6OLG|1|A2|C|449
6OLG|1|A2|C|450
*
6OLG|1|A2|G|692
6OLG|1|A2|U|693
6OLG|1|A2|G|694
6OLG|1|A2|C|695
6OLG|1|A2|G|696
*
6OLG|1|A2|C|1275
6OLG|1|A2|G|1276
6OLG|1|A2|A|1277
6OLG|1|A2|C|1278
6OLG|1|A2|G|1279
6OLG|1|A2|U|1280
6OLG|1|A2|C|1281

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AE

60S ribosomal protein L6

Chain Ae

60S ribosomal protein L32

Chain Af

60S ribosomal protein L35a