J3_6OLG_006

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCAG*CGUAGC*GUCCGAC

Length

17 nucleotides

Bulged bases

6OLG|1|A2|A|1595

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|G|1527
6OLG|1|A2|C|1528
6OLG|1|A2|A|1529
6OLG|1|A2|G|1530
*
6OLG|1|A2|C|1562
6OLG|1|A2|G|1563
6OLG|1|A2|U|1564
6OLG|1|A2|A|1565
6OLG|1|A2|G|1566
6OLG|1|A2|C|1567
*
6OLG|1|A2|G|1590
6OLG|1|A2|U|1591
6OLG|1|A2|C|1592
6OLG|1|A2|C|1593
6OLG|1|A2|G|1594
6OLG|1|A2|A|1595
6OLG|1|A2|C|1596

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain AR

60S ribosomal protein L19

Chain Ag

60S ribosomal protein L34

Chain Aj

60S ribosomal protein L37

Chain Ap

60S ribosomal protein L37a