J3_6OLG_037

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UU*AGAAGC*GGUGGA

Length

14 nucleotides

Bulged bases

6OLG|1|A2|A|1787, 6OLG|1|A2|G|1816

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|U|1708
6OLG|1|A2|U|1709
*
6OLG|1|A2|A|1784
6OLG|1|A2|G|1785
6OLG|1|A2|A|1786
6OLG|1|A2|A|1787
6OLG|1|A2|G|1788
6OLG|1|A2|C|1789
*
6OLG|1|A2|G|1813
6OLG|1|A2|G|1814
6OLG|1|A2|U|1815
6OLG|1|A2|G|1816
6OLG|1|A2|G|1817
6OLG|1|A2|A|1818

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AF

60S ribosomal protein L7

Chain AT

60S ribosomal protein L21

Chain Ab

60S ribosomal protein L29