J3_6OLG_040

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUC*GCCUCACGAUC*GUGUC

Length

19 nucleotides

Bulged bases

6OLG|1|A2|U|4336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|G|4190
6OLG|1|A2|U|4191
6OLG|1|A2|C|4192
*
6OLG|1|A2|G|4293
6OLG|1|A2|C|4294
6OLG|1|A2|C|4295
6OLG|1|A2|U|4296
6OLG|1|A2|C|4297
6OLG|1|A2|A|4298
6OLG|1|A2|C|4299
6OLG|1|A2|G|4300
6OLG|1|A2|A|4301
6OLG|1|A2|U|4302
6OLG|1|A2|C|4303
*
6OLG|1|A2|G|4333
6OLG|1|A2|U|4334
6OLG|1|A2|G|4335
6OLG|1|A2|U|4336
6OLG|1|A2|C|4337

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AQ

60S ribosomal protein L18

Chain AT

60S ribosomal protein L21

Chain Aa

60S ribosomal protein L27a

Chain Ao

60S ribosomal protein L36a