J3_6OLG_042
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUCGGUUGGCCUCGGAUAGCCGGUC*GGGUCCGGUGCGGAGUGCCCUUC*GCACCGCACGUUCGUGG
- Length
- 65 nucleotides
- Bulged bases
- 6OLG|1|A2|C|4718, 6OLG|1|A2|C|4719, 6OLG|1|A2|U|4725, 6OLG|1|A2|U|4827, 6OLG|1|A2|G|4828, 6OLG|1|A2|G|4830, 6OLG|1|A2|G|4833, 6OLG|1|A2|U|4834, 6OLG|1|A2|U|4839, 6OLG|1|A2|U|4840, 6OLG|1|A2|A|4896, 6OLG|1|A2|C|4898, 6OLG|1|A2|A|4901, 6OLG|1|A2|C|4902, 6OLG|1|A2|U|4908
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLG|1|A2|C|4709
6OLG|1|A2|U|4710
6OLG|1|A2|C|4711
6OLG|1|A2|G|4712
6OLG|1|A2|G|4713
6OLG|1|A2|U|4714
6OLG|1|A2|U|4715
6OLG|1|A2|G|4716
6OLG|1|A2|G|4717
6OLG|1|A2|C|4718
6OLG|1|A2|C|4719
6OLG|1|A2|U|4720
6OLG|1|A2|C|4721
6OLG|1|A2|G|4722
6OLG|1|A2|G|4723
6OLG|1|A2|A|4724
6OLG|1|A2|U|4725
6OLG|1|A2|A|4726
6OLG|1|A2|G|4727
6OLG|1|A2|C|4728
6OLG|1|A2|C|4729
6OLG|1|A2|G|4730
6OLG|1|A2|G|4731
6OLG|1|A2|U|4732
6OLG|1|A2|C|4733
*
6OLG|1|A2|G|4819
6OLG|1|A2|G|4820
6OLG|1|A2|G|4821
6OLG|1|A2|U|4822
6OLG|1|A2|C|4823
6OLG|1|A2|C|4824
6OLG|1|A2|G|4825
6OLG|1|A2|G|4826
6OLG|1|A2|U|4827
6OLG|1|A2|G|4828
6OLG|1|A2|C|4829
6OLG|1|A2|G|4830
6OLG|1|A2|G|4831
6OLG|1|A2|A|4832
6OLG|1|A2|G|4833
6OLG|1|A2|U|4834
6OLG|1|A2|G|4835
6OLG|1|A2|C|4836
6OLG|1|A2|C|4837
6OLG|1|A2|C|4838
6OLG|1|A2|U|4839
6OLG|1|A2|U|4840
6OLG|1|A2|C|4841
*
6OLG|1|A2|G|4894
6OLG|1|A2|C|4895
6OLG|1|A2|A|4896
6OLG|1|A2|C|4897
6OLG|1|A2|C|4898
6OLG|1|A2|G|4899
6OLG|1|A2|C|4900
6OLG|1|A2|A|4901
6OLG|1|A2|C|4902
6OLG|1|A2|G|4903
6OLG|1|A2|U|4904
6OLG|1|A2|U|4905
6OLG|1|A2|C|4906
6OLG|1|A2|G|4907
6OLG|1|A2|U|4908
6OLG|1|A2|G|4909
6OLG|1|A2|G|4910
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AE
- 60S ribosomal protein L6
- Chain AH
- 60S ribosomal protein L9
- Chain AM
- 60S ribosomal protein L14
- Chain AO
- 60S ribosomal protein L13a
- Chain AS
- 60S ribosomal protein L18a
- Chain Af
- 60S ribosomal protein L35a
Coloring options: